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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951953.1_cds_XP_016491846.1_82121
CDS Infomation

[gene=LOC107811434] [db_xref=GeneID:107811434] [protein=laccase-4-like] [protein_id=XP_016491846.1] [location=join(141432..141512,142461..142612,142705..142949,143034..143162,143434..144360,144928..145058)] [gbkey=CDS]
Sequence

ATGGAGTCTTGGCTTCGTTTTTTCGTCCTCTTGGCTTGTCTCTCTCCAGCTTTTGGCATT
ACTCGGCATTACAAGTTCAATGTGGTAATGAGGAACATGAGTCGCCTGTGTTCGACCAAG
CCAATTGTCACTGTTAATGGAAGGTTCCCAGGACCCACAATATATGCTAGAGAAGATGAT
AGAGTGCTCATCAAGGTTGTTAACCATGTCAAATATAACGTCTCTATCCATTGGCACGGG
ATCAGACAACTTAGAACTGGTTGGGCAGATGGACCGGCATACATCACACAATGTCCGATT
CAACCAGGGCAAAGCTACATATACAACTTCACAATCACAGGGCAAAGGGGTACACTCTTT
TGGCATGCTCATGTTTTGTGGCTAAGGTCCACTGTCCATGGTGCTATTGTCGTCCTCCCT
AAGCGTGGTGTGCCTTATCCATTCCCCAAACCCAACCATGAAGCTGTCGTTGTTTTAGCT
GAATGGTGGAAATCGGATACTGAAGCTGTGATCAATGAAGCTCTAAAGTCAGGTTTAGCC
CCTAATGTTTCCGATGCTCACACAATCAATGGTCATCCTGGACCAGTTTCCAATTGTCCG
ACCCAAGGTGGATACACTTTGAGTGTTAAACCTGGAAAAACATACATGTTACGAGTGATC
AATGCTGCGCTCAATGAAGAACTCTTCTTTAAGATTGCTGGCCACAAAATGACAGTAGTT
GAAGTTGATGCAACCTACGTAAAGCCCTTTAAAACAGACACAATCGTAATCGCCCCTGGC
CAAACCACAAATGTTATAGTCACTGCTGATCAAAGTTTCGGAAAATATATGGTTGCTGCT
TCTCCCTTTATGGACGCCCCTATCGCCGTCGACAACATCACGGCTACCGCCACGTTGCAT
TACTCCGGCGCATTGGGCAGTTCTCCCACAACTCTCACTAGTACTCCACCCCAAAACGCC
ACTTCAGTCGCCAACAATTTTCTTGACGCTCTCAAAAGTCTTAATTCGAAAAAATACCCA
GCGAAAGTTCCACAAACAGTGGATCATTCGCTGTTTTTCACTGTTGGACTAGGAATTAAT
CCATGTCCAACGTGTAAACAAGCTAATGGCAGCAGAGTTGTCGCTAGTGTAAATAATGTT
ACATTTATTATGCCAACCGTAGCGCTTTTACAAGCGCATTTCTTTGGCATAAATGGAGTT
TTCACAACAGATTTTCCAGCGAATCCGCCGTTCGTTTTTAACTATACTGGAACGTCACCC
ACAAACTTGGCTACAACGAAAGGGACAAAGGTTTATCGGTTGCCTTATAATGCAACAGTT
CAATTAGTTTTGCAGGATACTGGAATTATAGCCCCTGAAAACCATCCAATCCATTTGCAT
GGTTTCAATTTCTTTTTAGTGGGTAAAGGACTAGGAAATTTCAATTCCAAAACAGACCCT
AAGAATTTTAATCTTATTGATCCTGTTGAAAGGAATACAATTGGAGTGCCTTCTGGAGGA
TGGGTTGCCATAAGATGGCGTGCTGACAATCCAGGAGTTTGGTTTATGCATTGTCATCTA
GAGGTGCACACAACATGGGGATTGAAAATGGCATTCCTTGTAGATAATGGCAAGGGTTCT
AATGAGTCACTTTTGCCACCACCAAAGGATCTCCCAAAATGCTAA

Peptide Sequence

PEP ID

XP_016491846.1
PEP Infomation

PREDICTED: laccase-4-like [Nicotiana tabacum]
Sequence

MESWLRFFVLLACLSPAFGITRHYKFNVVMRNMSRLCSTKPIVTVNGRFPGPTIYAREDD
RVLIKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQSYIYNFTITGQRGTLF
WHAHVLWLRSTVHGAIVVLPKRGVPYPFPKPNHEAVVVLAEWWKSDTEAVINEALKSGLA
PNVSDAHTINGHPGPVSNCPTQGGYTLSVKPGKTYMLRVINAALNEELFFKIAGHKMTVV
EVDATYVKPFKTDTIVIAPGQTTNVIVTADQSFGKYMVAASPFMDAPIAVDNITATATLH
YSGALGSSPTTLTSTPPQNATSVANNFLDALKSLNSKKYPAKVPQTVDHSLFFTVGLGIN
PCPTCKQANGSRVVASVNNVTFIMPTVALLQAHFFGINGVFTTDFPANPPFVFNYTGTSP
TNLATTKGTKVYRLPYNATVQLVLQDTGIIAPENHPIHLHGFNFFLVGKGLGNFNSKTDP
KNFNLIDPVERNTIGVPSGGWVAIRWRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGS
NESLLPPPKDLPKC

Transcript Sequence

Gene sequence data has not been registered.